📖 Reading material - Neuroscience for machine learners

Connectome¶

Humans¶

Liu et al. (2023) “Interactions of glial cells with neuronal synapses, from astrocytes to microglia and oligodendrocyte lineage cells”
von Bartheld et al. (2016) “The search for true numbers of neurons and glial cells in the human brain: A review of 150 years of cell counting”
Cohen et al., (2000) “The visual word form area: Spatial and temporal characterization of an initial stage of reading in normal subjects and posterior split-brain patients”
Béna & Goodman (2023) “Dynamics of specialization in neural modules under resource constraints”

References¶

White, J. G., Southgate, E., Thomson, J. N., & Brenner, S. (1997). The structure of the nervous system of the nematode Caenorhabditis elegans. Philosophical Transactions of the Royal Society of London. B, Biological Sciences, 314(1165), 1–340. 10.1098/rstb.1986.0056
Cook, S. J., Jarrell, T. A., Brittin, C. A., Wang, Y., Bloniarz, A. E., Yakovlev, M. A., Nguyen, K. C. Q., Tang, L. T.-H., Bayer, E. A., Duerr, J. S., Bülow, H. E., Hobert, O., Hall, D. H., & Emmons, S. W. (2019). Whole-animal connectomes of both Caenorhabditis elegans sexes. Nature, 571(7763), 63–71. 10.1038/s41586-019-1352-7
Witvliet, D., Mulcahy, B., Mitchell, J. K., Meirovitch, Y., Berger, D. R., Wu, Y., Liu, Y., Koh, W. X., Parvathala, R., Holmyard, D., Schalek, R. L., Shavit, N., Chisholm, A. D., Lichtman, J. W., Samuel, A. D. T., & Zhen, M. (2021). Connectomes across development reveal principles of brain maturation. Nature, 596(7871), 257–261. 10.1038/s41586-021-03778-8
Winding, M., Pedigo, B. D., Barnes, C. L., Patsolic, H. G., Park, Y., Kazimiers, T., Fushiki, A., Andrade, I. V., Khandelwal, A., Valdes-Aleman, J., Li, F., Randel, N., Barsotti, E., Correia, A., Fetter, R. D., Hartenstein, V., Priebe, C. E., Vogelstein, J. T., Cardona, A., & Zlatic, M. (2023). The connectome of an insect brain. Science, 379(6636). 10.1126/science.add9330
Abbott, L. F., Bock, D. D., Callaway, E. M., Denk, W., Dulac, C., Fairhall, A. L., Fiete, I., Harris, K. M., Helmstaedter, M., Jain, V., Kasthuri, N., LeCun, Y., Lichtman, J. W., Littlewood, P. B., Luo, L., Maunsell, J. H. R., Reid, R. C., Rosen, B. R., Rubin, G. M., … Van Essen, D. C. (2020). The Mind of a Mouse. Cell, 182(6), 1372–1376. 10.1016/j.cell.2020.08.010
Liu, Y., Shen, X., Zhang, Y., Zheng, X., Cepeda, C., Wang, Y., Duan, S., & Tong, X. (2023). Interactions of glial cells with neuronal synapses, from astrocytes to microglia and oligodendrocyte lineage cells. Glia, 71(6), 1383–1401. 10.1002/glia.24343
von Bartheld, C. S., Bahney, J., & Herculano‐Houzel, S. (2016). The search for true numbers of neurons and glial cells in the human brain: A review of 150 years of cell counting. Journal of Comparative Neurology, 524(18), 3865–3895. 10.1002/cne.24040
Cohen, L., Dehaene, S., Naccache, L., Lehéricy, S., Dehaene-Lambertz, G., Hénaff, M.-A., & Michel, F. (2000). The visual word form area. Brain, 123(2), 291–307. 10.1093/brain/123.2.291
Béna, G., & Goodman, D. F. M. (2021). Dynamics of specialization in neural modules under resource constraints. arXiv. 10.48550/ARXIV.2106.02626